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Search HumanMine. Enter names, identifiers or keywords for genes, proteins, pathways, ontology terms, authors, etc. (e.g. eve, PPARG_HUMAN, glycolysis, ACTN2).

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Enter a list of identifiers.

墙翻伋理网址

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HumanMine integrates many types of data for Homo sapiens and Mus musculus. You can run flexible queries, export results and analyse lists of data.

Take a tour

HumanMine loads Gene models and sequence from the NCBI. We load additional Gene information from several other sources. Read more


墙翻伋理网址

  • GO term    Genes
  • Gene  伋理http  GO terms.
  • Gene    Chromosomal location.
  • Chromosomal Location    All Genes + Transcripts + Exons
  • Region    Genes
  • Gene + GO term    Genes by GO term
  • Gene  墙翻伋理网址  Overlapping genes.
  • Gene -> Protein + protein sequence

More queries

HumanMine loads Protein annotation and sequence from UniProt and domain information from InterPro. We cross-reference protein information from many additional sources. Read more


Query for proteins:

  • Gene A  伋理http  Interaction <-- Gene B
  • Gene    Proteins.
  • Gene    Protein tissue Localisation
  • Protein    Protein Complex
  • Protein    Interactions
  • Gene    protein complex
  • Protein  伋理http  Sequence
  • Protein Domain    Protein and Genes

伋理http

HumanMine loads SNP data from the GWAS catalogue. Read more


Query for snps:

  • SNP    GWAS Hits
  • Gene Report  伋理http  GWAS hit

More queries

HumanMine loads Disease to Gene mappings from OMIM. Read more


Query for diseases:

  • Gene  伋理http  Disease (OMIM)
  • Disease    Gene(s)
  • Gene    Disease + HPO annotations (Human Phenotype Ontology
  • Disease Expression    Genes
  • Gene    Alleles and Disease (clinVar data)
  • Gene (Hum OR Rat)  伋理http  Mouse Allele (Phenotype)
  • Mouse Gene  墙翻伋理网址  Allele [Phenotype]
  • Human Disease    Human Gene + Orthologue Gene(s)

More queries

HumanMine loads Pathway annotations from KEGG and Reactome and Gene Ontology (GO) annotations from MGI and UniProt. Read more


Query for function:

  • GO term    Genes
  • Gene    GO terms.
  • Tissue    Gene Expression (Array Express)
  • Gene    Gene Expression (Tissue, Disease; Array Express, E-MTAB-62)
  • Pathway  伋理http  Genes
  • Gene  墙翻伋理网址  Disease + HPO annotations (Human Phenotype Ontology
  • Gene + GO term    Genes by GO term
  • Gene A    Pathways <-- Gene B

More queries

HumanMine loads Interactions from IntAct and BioGRID. Read more


Query for interactions:

  • Gene  伋理http  Interactions
  • Gene A  伋理http  Interaction <-- Gene B
  • Gene + Tissue Expression    Interactors that are expressed in that tissue
  • Protein    Protein Complex
  • Gene + Pathway  伋理http  Interactions
  • Protein    Interactions
  • Gene    protein complex
  • Gene    Physical and Genetic Interactions

More queries

HumanMine loads homologue predictions from Panther. 伋理http


Query for homology:

  • Gene  伋理http  Orthologues
  • Gene (Hum OR Rat)    Mouse Allele (Phenotype)

More queries

Perl, Python, Ruby and Java API

perl java python ruby

Access our HumanMine data via our Application Programming Interface (API) too! We provide client libraries in the following languages:

  • Perl
  • Python
  • Ruby
  • Java



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